EXOCARTA was the first of these databases to be launch and includes data only from exosomes (http://www.exocarta.org/) [148,149,150,151]. Vesiclepedia was launched later and, now, it gathers information from all classes of extracellular vesicles among them exosomes, microparticles and microvesicles ( http://microvesicles.org/ ) [ 152 , 153 ].

2019-05-28 · Dublin, May 28, 2019 (GLOBE NEWSWIRE) -- The "Exosome Diagnostics and Therapeutics: Global Markets" report has been added to ResearchAndMarkets.com's offering. This report represents a current and

TCGA. The Cancer Genome Atlas: From the analysis of over 11,000 tumors from 33 of the most prevalent forms of cancer, the Pan-Cancer Atlas provides a uniquely comprehensive, in-depth, and interconnected understanding of how, where, and why tumors arise in humans. On Monday and Tuesday April 19–20, 2021, the ERCC will host a free online workshop on exRNA data analysis. There are three target audiences: experimentalists generating exRNA-seq data, computational and MORE Researchers at La Trobe University have created Vesiclepedia, a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies. Currently, Vesiclepedia contains data obtained from 1254 EV studies, 38 146 RNA entries, 349 988 protein entries and 639 lipid/metabolite entries.

of 8682 protein coding genes collated from ExoCarta, Vesiclepedia and 12 Apr 2016 gene product annotations associated with these terms from Vesiclepedia and ExoCarta, conversion of the extracted annotations to Gene has developed and maintains two widely used web-based databases for exosome/extracellular vesicle research, namely ExoCarta and Vesiclepedia. DisGeNet, DoRothEA, ELM, EMBRACE, Ensembl, Exocarta, GPCRdb, GSEA, TopDB, UniProt, Vesiclepedia, activity flow, adhesion, annotations, cancer, ExoCarta is a manually curated compendium of exosomal proteins, RNA and lipids. Vesiclepedia is a manually curated and community annotation driven 7 Jun 2019 The data were extracted from the Exocarta, Vesiclepedia, UniProt, Open Target, DisGeNET, and Atlas databases. The majority of the proteins 10 May 2017 that the majority of the previously reported myokines/exerkines are found in extracellular vesicles databases (Vesiclepedia and ExoCarta). 2017年12月21日 ExoCarta, an exosome database, provides with the contents that were identified in exosomes in multiple organisms.

Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation. Abstract: Extracellular vesicles (EVs) are membraneous vesicles released by a variety of cells into their microenvironment. Recent studies have elucidated the role of EVs in intercellular communication, pathogenesis, drug, vaccine and gene-vector delivery,

On Monday and Tuesday April 19–20, 2021, the ERCC will host a free online workshop on exRNA data analysis. We hope the interaction between experimentalists and data scientists in the field of exRNA will increase understanding and foster collaboration between the two communities.

Analytic tools in EVpedia, Exocarta, and Vesiclepedia. Fig. 2. Browse function of EVpedia. With ''Browse'' menu. Fig. 3. Gene Ontology enrichment and network

Here you will find links to online seminars, journal clubs, and classes on exRNA and extracellular vesicle research. We no longer track individual seminars here –– we could not keep up! On Monday and Tuesday April 19–20, 2021, the ERCC hosted a free online workshop on exRNA data analysis.

Data deposited to ExoCarta can also be accessed through Vesiclepedia; however, only high quality exosomal datasets deposited to Vesiclepedia can be accessed through ExoCarta. On Monday and Tuesday April 19–20, 2021, the ERCC will host a free online workshop on exRNA data analysis. We hope the interaction between experimentalists and data scientists in the field of exRNA will increase understanding and foster collaboration between the two communities. In addition, we have initiated an ongoing process of extractions of gene product annotations associated with these terms from Vesiclepedia and ExoCarta, conversion of the extracted annotations to Gene Association File (GAF) format for batch submission to GO, and curation of the submitted annotations by the GO Consortium. Education.
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However, there has been no resource on vesicular components (proteins, nucleic acids, and lipids) derived from diverse types of prokaryotic and eukaryotic cells. In addition, an analytical tool for their Gene Vesiclepedia (http://www.microvesicles.org) is a manually curated compendium that contains molecular data identified in all classes of EVs, including AB, exosomes, large dense core vesicles, microparticles, and shedding microvesicles. The main criterion for manual curation was the presence of these vesicles in the extracellular microenvironment (EVs) as approved by the investigators who undertook the research. An overall comparison of EVpedia with Exocarta and Vesiclepedia is shown in Tables I and II. These three web‐based repositories contain proteomic, transcriptomic and lipidomic studies of non‐mammalian eukaryotic and mammalian EVs. However, only EVpedia provides additional proteomic and lipidomic studies on prokaryotic EVs (Table I). ExoCarta collects information regarding the cargoes of exosomes, whereas Vesiclepedia includes microvesicles and apoptotic bodies in their consortium [101,102].

To benefit the scientific community, existing free Web-based resources including ExoCarta, EVpedia, and Vesiclepedia catalog multiple datasets. These resources aid in elucidating molecular mechanism and pathophysiology underlying different disease conditions from which EVs are isolated. Vesiclepedia: VP_5277: ExoCarta: ExoCarta_5277: Entrez Gene: 5277: HGNC: 8957: MIM: 311770 PIGA identified in extracellular vesicles derived from the following tissue/cell type: Colorectal cancer cells [Microvesicles] More >>> 19930720 : T cells [Microparticles] More >>> 16342139 : Experiment description of studies that identified PIGA in Researchers at La Trobe University have created Vesiclepedia, a web-based compendium of RNA, proteins, lipids and metabolites that are identified in EVs from both published and unpublished studies.
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01/09/2013 - Vesiclepedia Version 2.1 released!! 01/09/2013 - Addition of new datasets to Vesiclepedia. 01/04/2013 - Vesiclepedia highlighted in Nature Methods. 01/04/2013 - Manuscript describing Vesiclepedia was highlighted in the tool section of Nature Methods. 19/12/2012 - Vesiclepedia published in …

To benefit the scientific community, existing free Web-based resources including ExoCarta, EVpedia, and Vesiclepedia catalog multiple datasets. These resources aid in elucidating molecular mechanism and pathophysiology underlying different disease conditions from which EVs are isolated. These databases (Vesiclepedia, Exocarta, HCSD) curate secreted protein-level results from experiments already published in the literature involving different sample types and were used to confirm To enhance validation of EV-associated biomarkers and functions and, in general, to centralize knowledge on EV cargo, a multitude of databases have been created. EV-contained RNA and/or proteins are accessible on specialized databases such as EVpedia, Vesiclepedia, Exocarta, and more recently ExoRbase and EVmiRNA [16–20].